Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803591.1_cds_XP_016484998.1_7578
CDS Infomation

[gene=LOC107805460] [db_xref=GeneID:107805460] [protein=luminal-binding protein] [protein_id=XP_016484998.1] [location=complement(join(4244..4742,4833..4915,5020..5174,5279..5758,6114..6356,6444..6658,6744..7011,8319..8376))] [gbkey=CDS]
Sequence

ATGGCTGGCTATTTGAGGCGAGGAAGTTCTCTCGTCGTGCTAGCGATCGTCCTATTCGGA
TGTCTTTCTGCACTTTCCATTGCAAAAGAGGAGGCTACCAAACTTGGAACAGTTATTGGA
ATTGACCTTGGGACAACCTATTCTTGTGTCGGTGTTTACAAGAATGGTCACGTTGAGATT
ATAGCTAATGACCAAGGAAACCGTATTACACCATCATGGGTTGGATTCACTGATAGTGAG
AGGTTGATTGGTGAGGCTGCAAAGAACCAGGCAGCTGTCAACCCTGAAAGGACTATCTTT
GATGTTAAGAGGCTTATTGGAAGAAAGTTTGAGGACAAGGAAGTACAGAGGGATATGAAG
CTGGTCCCATACAAGATTGTAAACAAGGATAGTAAGCCCTACATACAAGTCAAAATCAAG
GATGGAGAAACTAAGGTATTTAGTCCTGAGGAAATCAGTGCCATGATTTTGACAAAAATG
AAGGAGACAGCTGAAGCATTCCTTGGGAAGAAAATTAAGGATGCTGTGGTTACTGTTCCT
GCATATTTCAATGATGCACAAAGACAGGCAACAAAGGATGCTGGCGTTATTGCTGGATTA
AATGTTGCTAGAATTATTAACGAGCCAACAGCTGCAGCCATCGCCTATGGACTGGACAAG
AAAGGTGGTGAGAAGAACATTCTTGTCTTTGACCTTGGTGGCGGGACATTTGATGTCAGT
ATTCTGACCATTGATAATGGAGTGTTTGAGGTTCTTTCTACCAACGGTGACACCCATCTT
GGAGGTGAGGACTTTGATCAAAGGATTATGGAGTACTTCATCAAGTTGATTAAGAAGAAG
CATGGTAAGGACATCAGCAAGGATAACAGAGCTCTTGGAAAGCTAAGGAGAGAAGCTGAG
CGTGCCAAGAGAGCCCTGAGTAGCCAGCACCAAGTCCGGGTTGAGATTGAATCACTATTT
GATGGTACTGATTTCTCTGAACCATTGACCCGTGCTCGCTTTGAGGAGTTGAACAATGAT
CTCTTCAGAAAGACAATGGGACCCGTGAAGAAGGCTATGGAAGATGCTGGGTTAGAGAAG
AACCAGATTGATGAGATAGTTCTTGTTGGTGGAAGCACCAGAATTCCTAAAGTGCAACAG
CTCCTGAAGGACTATTTTGACGGGAAGGAGCCCAACAAGGGTGTAAATCCTGATGAGGCA
GTTGCTTATGGTGCTGCTGTTCAAGGTGGTATCCTTAGTGGAGAGGGTGGAGATGAAACT
AAAGATATTCTTCTCCTGGATGTCGCTCCTCTCACCCTTGGTATTGAAACTGTTGGTGGT
GTCATGACCAAATTGATTCCTAGGAACACCGTCATCCCAACCAAGAAGTCCCAAGTCTTC
ACCACTTACCAAGACCAGCAGACCACCGTCTCCATTCAGGTTTTTGAAGGTGAAAGGAGT
CTTACTAAGGACTGTAGGCTGCTTGGAAAGTTTGATCTGACAGGAATTGCCCCGGCTCCA
AGGGGAACCCCACAAATTGAGGTGACATTTGAAGTTGATGCCAATGGTATCTTGAATGTC
AAAGCAGAAGACAAGGGCACTGGTAAATCCGAGAAGATTACCATTACAAACGACAAGGGC
CGCTTAAGCCAAGAAGAGATTGAGCGTATGGTTCGTGAAGCAGAAGAGTTTGCCGAGGAA
GACAAGAAGGTGAAGGAGAGAATTGATGCCCGTAACAGTCTTGAAACCTACGTGTACAAC
ATGAAAAACCAGATCAACGACAAGGACAAGCTAGCTGACAAGCTGGAGTCTGATGAGAAG
GAGAAGATTGAAACAGCAACAAAAGAAGCCCTCGAATGGCTAGACGACAACCAAAGCGCC
GAGAAAGAGGATTACGAAGAGAAGCTTAAGGAGGTAGAGGCAATCTGCAACCCAATTATC
ACAGCTGTTTATCAAAGATCAGGTGGAGCCCCAGGTGGTGGTTCATCGGAAGAAGAAGAA
GACGGCCATGATGAGCTGTAA

Peptide Sequence

PEP ID

XP_016484998.1
PEP Infomation

PREDICTED: luminal-binding protein [Nicotiana tabacum]
Sequence

MAGYLRRGSSLVVLAIVLFGCLSALSIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEI
IANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMK
LVPYKIVNKDSKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVP
AYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVS
ILTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAE
RAKRALSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEK
NQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDET
KDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERS
LTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKG
RLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEK
EKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQRSGGAPGGGSSEEEE
DGHDEL

Transcript Sequence

Gene sequence data has not been registered.